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  3. Neurophysiology Tools Tutorial
Neurophysiology Tools Tutorial
McGovern Institute for Brain Research

Neurophysiology Tools Tutorial

Add to CalendarAmerica/New_YorkNeurophysiology Tools Tutorial 09/13/2024 11:00 am09/13/2024 1:00 pmBuilding 46,Seminar Room 3189
September 13, 2024
11:00 am - 1:00 pm
Location
Building 46,Seminar Room 3189
Contact
nima.dehghani@mit.edu
    Description

    As part of ODIN-MIT (https://odin.mit.edu/), we are excited to announce an upcoming tutorial session on two powerful neurophysiology tools, Neurosift and Dendro, developed by Jeremy Magland, Senior Data Scientist in Numerical Analysis at the Center for Computational Mathematics, Flatiron Institute. 

    Neurosift is a browser-based tool designed for the visualization of NWB (Neurodata Without Borders) files, whether stored locally or hosted remotely, and enables interactive exploration of neurophysiology files on DANDI Archive. Dendro simplifies the spike sorting process by allowing users to import electrophysiology datasets from DANDI and select from a variety of spike sorting algorithms available in Dendro to spike sort their data. These tools have recently been integrated, allowing users to launch Dendro jobs from Neurosift and view the outputs produced by Dendro within Neurosift.

    Neurosift

    flatironinstitute/neurosift: Browser-based NWB visualization and DANDI exploration (github.com)

    Jeremy Magland will be leading a 2-hr session to describe and demonstrate these tools. This session will be highly beneficial for those working with electrophysiology and optophysiology data (including NWB data https://www.nwb.org/ on the DANDI archive https://dandiarchive.org/).

     

    Attendance is free but registration is required:

    https://www.eventbrite.com/e/neurophysiology-optophys-electrophys-tools-tutorial-session-tickets-1012494286667?aff=oddtdtcreator

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